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Group Members

Graduate students

Brad Bauer

Joe Davis

Yang Zhong 

 

Post-Doctoral Associates

G. Lee Warren 

 

Undergraduate students

Dave Meninger 

 

           pg2008.jpg

Front Row: Dr. G. Lee Warren, Yang Zhong, Brad Bauer

Back Row: Dave Meninger, Joe Davis, Sandeep Patel 




 

 
Funding Sources
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Immediate Post-Doctoral Openings

Post-Doctoral

We are searching for highly motivated and driven individuals looking for research opportunities in a wide variety of research within the general realm of computational chemistry.  Current topics of interest to the PI include:

1. Development, Testing, Coding, Application of Polarizable Force Fields

2. Exploration of Aqueous Liquid-Vapor Interfaces via Molecular Dynamics Simulations Using Polarizable and  Non-Polarizable Force Fields

3. Studies of Properties of Lipid Membranes arising from application of Polarizable Force Fields

4. Protein-Ligand Binding

5. Hardware-Based Acceleration of Molecular Dynamics Simulations with particular focus on GPU Cards

6. Development of Charge Transfer Force Fields

7. Investigation of Phase-Dependent Polarization Effects and Implications for Interfacial Systems

  Candidates should send a C.V. and the names and email addresses of 3 (three) individuals in the capacity of mentors, advisors, etc. The candidates should have a strong background in statistical mechanics, quantum mechanics, molecular modeling (MD, MC, ab initio / DFT ). Ideal candidates would have equal strengths in MD and ab initio methods with proven track record of publshing in both areas; particular focus on biophysical research topics are highly desirable. Strong programming skills (Unix, Linux, C++, Fortran, Perl, Python, shell scripting) are required.  

Interested applicants are encouraged to initiate contact via email:  sapatel{at}udel.edu

Appointments can begin immediately and will initially be for one year. 

 
Group Meeting Schedule

Patel Group Meeting Schedule

Group Meetings Consist of Presentations of Individual Research or Leading Discussions of Current Literature in the Field. 

Location for Winter/Spring 2009: Brown Lab, Room 221.  Monday, 10 a.m.

 

June 2009

Week of                Presenter                                                           Topic


June 8                   Yang                                                               TBA

June 15                  Tim                                                                TBA

June 22                  Brad                                                               TBA

June 29                 Dave                                                               TBA

July  6                   Yang

July 13                  Tim

July 20                  Brad

July 27                  Dave

August 3                Yang

August 10               Tim

 

 
Publications 2004
1.    S. Patel, A. D. MacKerell, Jr., and C. L. Brooks III. CHARMM Fluctuating Charge Force Field for Proteins II. Protein/Solvent Properties from Molecular Dynamics Simulations Using a Non-Additive Electrostatic Model. Journal of Computational Chemistry. Vol. 25, pp. 1504-1514. 2004.
2.    S. Patel and C. L. Brooks III. CHARMM Fluctuating Charge Force Field for Proteins I. Parameterization and Application to Bulk Organic Liquid Simulations. Journal of Computational Chemistry, Vol. 25(1), pp. 1-15. 2004.

 
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